Data Analysis Service

If you have not done the experiment yet, please consider Premium Analysis Service. If you already have experimental data files, or if you want examine others' data for assessment of technologies, please read below.

Subio's Products and Services Data Analysis Service(for assessment) Premium Analysis Service FASTQ File Processing Service Data Analysis Service Basic Plug-in Advanced Plug-in Subio Platform System Plug-in Balloons are designed by Freepik.

What is the result of data analysis service do you think? You may imagine an Excel sheet of genes with fold change or p-values, or a heatmap in a PDF file. Yes, they are the output of so-called "data analysis". But how can you interpret them, or how can you measure the reliability of them? You cannot, because they are only a part of information.

It is only a starting point. The most difficult part of omics data analysis is interpreting them. Omics data is so complicated that you need to examine it from multi-angles and –layers. Due to its multifaceted nature, you can interpret it differently from others. It means it is very easy to get a wrong conclusion. Although you have to rightly understand the characteristics of data and the analysis steps to properly interpret, you cannot know about them from the limited information on Excel or PDF.

So we receive the raw data files from you, and return the SSA(Subio Series Archive) file. You can import the SSA file into Subio Platform to view not only the final result, but also intermediate results. You can see every step of normalization, pre-processing, filtering, statistical tests and multivariate analysis. And we explain each of them to help your rightly understanding the data.

But this is all what we can do. After that, it is you who closely look at the data, and interpret it. Please check the whole workflow to see what we do, and what you do.

We have supported many researchers, and one of them published a paper in Nature magazine.

Data Analysis Service flow

It is ultra-hard to interpret omics data and the analysis results and discover something biologically significant. We support your challenge from the following three points.

  1. Free online support.
  2. Supporting your teamwork.
  3. Supporting your comparing with other studies.

Free Online Support

On delivering the SSA file, we explain you the characteristics and limitation of the experimental data as showing how to visualize them on Subio Platform. And we illustrate each analysis step which we chose according to the characteristics. This is why our data analysis service is very useful especially for novice analysts, who tend to apply steps on a textbook as they are, without thinking if they are applicable case or not. We are sure they can learn quickly and deeply about omics data analysis by ordering the service for a variety of data sets, rather than reading textbook.

You can request online supports whenever you need. It is free, so it is efficient for you to ask when you encounter a question, rather than asking many questions at once.

Request a free online support

Supporting Your Teamwork

You can share the SSA file with team members or collaborators. It facilitates co-working and discussion on the data. It also enables re-analysis by a third-party to assure the quality of the analysis.

Supporting Your Comparing with Other Studies

If you find a gene showing an interesting pattern, maybe you want to know how does the gene behave in other data. You can order Data Analysis Service not only for your own data set, but also public data sets which are available from internet. Storing them in your Subio Platform allows your using them as a hypotheses testing tool, (You need a System Plug-in).

Price And Ordering

We accept:

  • Raw data files (TXT or CEL) of microarrays (gene expression, microRNA, exon, CGH, etc.)
  • TXT files of counts/FPKM or RPKM of RNA-seq
  • BED or TXT files of ChIP-seq or Methyl-seq
  • GEO accession ID (GSE or GDS number) or the download URL of data sets.
  • Please combine with FASTQ File Processing Service, if you have them.

Though the standard service charge is shown below, it depends on the data and steps of analysis. So we give you the final estimate after we check them. Please send your data as following the instruction to order a Data Analysis Service.

Plug-in Set users can order the Data Analysis Service at the discounted price. It is reasonable not only for those who do a lot of experiments per year, but also those who do a few per year. They can use this service on other researchers' data for the assessment before the experiment and confirmation after the experiment. So we recommend you order the service with a Plug-in Set.

Small Data Set *1 200 USD Special offer for orders with a Plug-in Set
Large Data Set 500 USD Special offer for orders with a Plug-in Set
PDF Report Option *2 50 USD
CD/DVD Delivery Option *3 50 USD
Small Data Set *1 200 EUR Special offer for orders with a Plug-in Set
Large Data Set 500 EUR Special offer for orders with a Plug-in Set
PDF Report Option *2 50 EUR
CD/DVD Delivery Option *3 50 EUR
Small Data Set *1 20,000 JPY Special offer for orders with a Plug-in Set
Large Data Set 50,000 JPY Special offer for orders with a Plug-in Set
PDF Report Option *2 5,000 JPY
CD/DVD Delivery Option *3 5,000 JPY
  • *1 Small Data Set: <100,000 rows and <100 samples. Data sets exceeding the criteria are classified as Large Data Set.
  • *2 We explain about the data and analysis steps in a web meeting. But if you want to keep the information as a file, you can add this option.
  • *3 If the conditions of acceptance require physical goods and do not allow data, you can add this option.
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