Subio Platformのご紹介

マイクロアレイ・NGSをはじめとするオミクスデータ専用解析ソフトウェア
~チームで生物学的意味を引き出す共同作業を実現するために~

何も考えない統計解析は、もう終わりにしよう

もしあなたが次のようなソフトを探しているなら、GeneSpringでもR/Bioconductorでも、どの解析ソフトを選んでもかまいません。 多少の差こそあれ、代替できないというほどの違いはないからです。

  • 簡単に結果を出して、無駄な時間を使いたくない。
  • 教科書や論文に記載されている方法と同じやり方で解析したい。
  • 真似するだけで解析ができるマニュアル・チュートリアルがほしい。

しかし、もしあなたのニーズが次のようなものなら、Subio Platform以外の選択肢はないでしょう。

  • 解析したが、よくわからない結果だったことがある。今回は何か別の方法を探している。
  • 解析ソフトの使い方だけでなく、データ解析について経験豊富な人に相談しながら深く学びたい。
  • 個人の狭い視野を超えるためにチームでデータを共有し、ディスカッションをして生物学的発見につなげたい。
  • 実験データを一報の論文を書くだけで終わらせず、将来にわたって利用できる長期的資産にしたい。

機能一覧

Line Graph View

Line Graph View は、Sample Group 間の発現量の変化を視覚化するのに適しています。グラフの上をドラッグすると、囲まれた範囲にある遺伝子が選択状態になり、選択された遺伝子は下段の Annotations タブでも強調表示されます。選択した遺伝子は、カメラのアイコンの隣に...

Scatter Plot (Measurement) View

Scatter Plot (Measurements) View では、任意の Sample Group を二つ、縦軸と横軸にセットしてそのSample Group間でシグナル値がどれくらい似ているか(または違っているか)を視覚化します。または、一つのSample Groupを縦軸と横軸の両方...

Tree View

Tree View は、階層型クラスタリングの結果を、ヒートマップとツリー構造で表示するものです。PDF などの画像となっているヒートマップは動きませんが、このツリーでは興味のある発現パターンの遺伝子群を取り出したり、発現プロファイルの似ているサンプル群にマークを付けるなど、インタラクティブに...

Pathway View

Pathway View は、パスウェイ図の上に発現パターンをヒートマップや棒グラフで重ねて表示するものです。パスウェイ上でドラッグすると、その範囲に表示されている遺伝子を選択することができます。生物学的にデータを解釈するのにとても役に立つ視覚化ツールです。

Genome View

Genome View は、ChIP-SeqやMethyl-Seq、タイリングアレイ、CGH アレイなどのゲノムの位置と深くかかわるデータの解析に必須のゲノムブラウザーです。遺伝子発現データを見ているときも、この視覚化ツールを使って発現が上昇あるいは減少している遺伝子群が、染色体の特定の領域に...

Scatter Plot (Samples) View

Scatter Plot (Samples) View は主成分分析(PCA)の結果を見るためのものです。または、独自にプロファイリングした結果に基づいてサンプルの近似度を表示することも可能です。散布図上の点は、Series Panel で 選択している DataSet に含まれる Sampl...

Venn Diagram

Venn Diagram は、複数の Measurement List をベン図上で組合せて、それらの間で和集合、関集合、差集合などを抽出することができます。Series Panelから輪の中にドラッグ&ドロップしてセットします。輪は3つしかありませんが、もし3つ以上のMeasurement ...

Editing Normalization

オミクスデータのノーマライズのプロセスは、その実験データの特性に強く依存するため一筋縄ではいきません。そのため、わたしたちはこの過程を自動化することはできず、ユーザーによる判断がその都度必要になると考えます。Subio Platform は、一つ一つの処理においてデータに何が起こってどのように...

Subio Platformを無料でダウンロード

下のフォームに必要事項をご記入後、ダウンロードボタンをクリックしてSubio Platformをダウンロードしてください。

必要システム構成

  • Windows 7 (64-bit) 以降 * / OS X 10.9 以降
  • 2 GHz 以上のプロセッサー
  • 4 GB 以上の RAM
  • 5 GB の空き容量のあるハードディスク
  • 1024 x 768 以上の画像解像度をサポートしているディスプレイ
  • 32-bit Windows版のご提供は2017年6月で終了しました。

お客様情報

* 必須項目

使用許諾契約書とプライバシーポリシー

Subio Platform End User License Agreement version 1.4

This Agreement, and any new versions, between Subio and You, covers all Your use of Subio Platform and Plug-ins from any terminals. Unless You have another agreement directly with Subio that controls and alters your use or distribution of Subio Platform, the conditions of the applicable license agreements below apply to you.

1. Definitions.

Agreement
this End User License Agreement, as may be renewed and/or amended from time to time.
You (or Your)
an individual or a legal entity exercising rights under, and complying with all of the terms and conditions of, this License or a future version of this License issued under Section2.8.
Subio
Subio Inc., headquartered in Amami island, Japan.
Plug-in Partner
an individual or a legal entity who develops and provides Plug-ins, which are distributed together with Subio Platform.
Subio Platform
Subio Platform, which Subio creates, owns and distributes exclusively. All Plug-ins depend on Subio Platform and they don't work alone nor even start without Subio Platform.
Plug-in
a software created by Subio or Plug-in Partners that works with, adds a variety of functionalities to and distributed together with Subio Platform. You will Activate a Plug-in to use it from a computer installing Subio Platform.
Activate (or Activation)
to authorize one computer to use a Plug-in for one year, by exercising a Serial Number.
Activation Key
a file created as a result of Activation, and it is necessary for Subio Platform to access to the Activated Plug-in.
Serial Number
Plug-in customers will purchase Serial Numbers from Subio or a reseller. Serial Number can be exercised only one time from a computer which is connected to the internet.

2. License and Restrictions

2.1 License of Subio Platform

Subject to the terms and conditions of this Agreement, Subio hereby grants You a limited, personal, non-commercial, non-exclusive, non-sublicensable, free of charge license to download, install and use Subio Platform on Your computer. You may use Subio Platform and Plug-ins anywhere like universities, research institutions, home or at work.

2.2 No Granting of Rights to Third Parties

You will not sell, assign, rent, lease, distribute, export, import, act as an intermediary or provider, or otherwise grant rights to third parties with regard to Subio Platform, Plug-ins or any part thereof.

2.3 No Modifications

You will not undertake, permit or authorize the modification, creation of derivative works, translation, reverse engineering, decompiling, disassembling or hacking of Subio Platform or any part thereof except to the extent permitted by law. Only one exception is that You are allowed reverse engineering of Subio.jar, Subio64.exe and jp.subio.plugins.b.jar.

2.4 Third Parties

Subio Platform incorporates and distributed together with software which are owned and controlled by third parties. Any such third party software falls under the scope of this Agreement. Any and all other third party software that may be distributed together with Subio Platform will be subject to You explicitly accepting a license agreement with that third party. You acknowledge and agree that You will not enter into a contractual relationship with Subio regarding such third party software and You will look solely to the applicable third party and not to Subio to enforce any of Your rights.

2.5 Use of Plug-ins

Subio Platform incorporates and distributed together with Plug-ins which are owned and controlled by Subio or Plug-in Partners. To use Plug-ins, You must purchase Serial Number for each Plug-in from Subio or resellers. If You buy them in Japan, You are also responsible for paying consumption tax. You will explicitly acknowledge the End User License Agreement of the Plug-in by its Activation. Once You have Activated a Plug-in, You may not change the expiration date and the authorized computer. You are not allowed to try, do nor inform any ways of Activation other than the instruction provided by Subio.

2.6 Prohibition of Plug-in Development

You are not allowed to create and distribute Plug-ins, unless You explicitly sign the Subio Plug-in Partner Agreement or an alternative agreement and comply with the terms and conditions thereof.

2.7 Exclusive Ownership

Any and all IP Rights in Subio Platform, contents of Subio website, all materials and documents which are created by Subio are and shall remain the exclusive property of Subio and/or its licensors. Nothing in this Agreement intends to transfer any such IP Rights to You.

2.8 New Versions of Subio Platform and Plug-ins

Subio, in its sole discretion, reserves the right to add additional features or functions, or to provide programming fixes, updates and upgrades, to Subio Platform and Plug-ins. Subio has no obligation to make available to You any subsequent versions of Subio Platform and Plug-ins. You may have to enter into a renewed version of this Agreement, in the event You want to download, install a new version of Subio Platform.

2.9 Suspension

Subio may, in its sole discretion and to the maximum extent permitted within Your jurisdiction, modify or discontinue or suspend Your ability to use any version of Subio Platform and Plug-ins, and/or disable any Subio Platform You may already have accessed or installed without any notice to You, for the repair, improvement, and/or upgrade of the underlying technology or for any other justifiable reason, including but not limited to, circumstances where You, at Subio's discretion, are in breach of this license, creating problems, possible legal liabilities, or engaging in fraudulent, immoral or illegal activities, or for other similar reasons.

3. Disclaimer of Warranties and Limitation of Liability

3.1 No Warranties

Installing Subio Platform enables You to manage, visualize and analyze Omics data. Subio cannot guarantee that You will always be able to get correct calculations and visualizations, nor can Subio guarantee that You can store data entirely and perfectly without inadequate modifications or losing integrity of the data. Subio Platform and Plug-ins are provided “as is” with no warranties whatsoever; Subio does not, either expressed, implied or statutory, make any warranties, claims or representations with respect to Subio Platform and Plug-ins, including, without limitation, warranties or conditions of quality, performance, non-infringement, merchantability, or fitness for use for a particular purpose. Subio further does not represent or warrant that Subio Platform and Plug-ins will always be available, accessible, uninterrupted, timely, secure, accurate, complete and error-free, nor does Subio warrant any quality of analysis with the Subio Platform and Plug-ins.

3.2 Your own Risk

Maintenance of Your computer and backup of Your data is entirely responsibility of You. You may be exposed to information security risks by using Subio Platform and Plug-ins with on-line resources. You further acknowledge and agree that the entire risk arising out of the use or inability to use Subio Platform and Plug-ins remains with You, to the maximum extent permitted by law. You understand, therefore, that You use Subio Platform and Plug-ins at Your own risk.

3.3 No Liability

The Subio Platform is being provided to You free of charge. You acknowledge and agree that Subio and its licensors and Subio staff will have no liability in connection with or arising from your use of Subio Platform and Plug-ins. Your only right or remedy with respect to any problems or dessatisfaction with Subio Platform and Plug-ins is to immediately uninstall and cease use of such Subio Platform and Plug-ins. Any indirect, incidental, special or consequential damages (including without limitation any loss of or corruption to data, interruption, computer failure or pecuniary loss) arising out of the use or inability to use Subio Platform and Plug-ins; and any loss of income, business or profits (whether direct or indirect) arising out of the use or inability to use Subio Platform and Plug-ins; any loss or damage which may be incurred by You as a result of;

  1. Any errors or incorrect calculations when using Subio Platform and Plug-ins;
  2. Any interruption or inability to use Subio Platform and Plug-ins or their functionalities due to network error or inaccessibility and unavailability of server;
  3. The suspension or termination of this agreement by You or by Subio for any reason; and
  4. The release or the decision not to release new versions of the Subio Platform and Plug-ins to you.

The limitations on Subio's liability to You described above shall apply whether or not Subio or the Subio staff has been advised of the possibility of such losses or damages arising.

3.4 Jurisdiction's Limitations

As some jurisdictions do not allow some of the exclusions or limitations as set forth above, some of these exclusions or limitations may not apply to You. In such event the liability will be limited to the maximum extent possible within the applicable legislation.

4. Miscellaneous

4.1 Entire Agreement

The terms and conditions of this Agreement constitute the entire agreement between You and Subio with respect to the subject matter hereof and will supersede and replace all prior understandings and agreements, in whatever form, regarding the subject matter. Nothing in this clause shall exclude or restrict the liability of either You or Subio arising out of fraud or fraudulent misrepresentation.

4.2 Partial Invalidity

If any provision, or any part of a provision, is found by any court or administrative body of competent jurisdiction to be illegal, invalid or unenforceable, and the provision (or part-provision) in question is not of a fundamental nature, the legality, validity or enforceability of the remainder of the terms and conditions of this Agreement (including the remainder of the term which contains the relevant provision) shall not be affected.

4.3 No Waiver

The failure to exercise, or delay in exercising, a right, power or remedy provided by this Agreement or by law shall not constitute a waiver of that right, power or remedy. If Subio waives a breach of any provision of the terms and conditions of this Agreement shall not operate as a waiver of a subsequent breach of that provision, or as a waiver of a breach of any other provision.

4.4 No Assignment

You are not allowed to assign the terms and conditions or any rights hereunder. Subio is allowed at its sole discretion to assign the terms and conditions or any rights hereunder to any third party, without giving prior notice.

4.5 Applicable Law and Competent Court

The terms and conditions of this Agreement shall be governed by and interpreted in accordance with the laws of Japan and shall be subject to the jurisdiction of the courts of the district of Kagoshima.

4.6 Language

The original English version of this Agreement may have been translated into other languages. In the event of inconsistency or discrepancy between the English version and any other language version, the English language version shall prevail.

You expressly acknowledge that you have read this agreement and understand the rights, obligations, terms and conditions set forth herein. By installing Subio Platform, You expressly consent to be bound by its terms and conditions and grant to Subio the rights set forth herein.

お使いのオペレーティングシステムはサポート対象外の可能性があります。下のボタンよりご希望のプラットフォームをお選びください。

オンラインデモのリクエスト

ウェブ会議を使ってSubio Platformとプラグインのデモをさせていただきます。 データ解析というと統計解析ばかりが注目されがちですが、本当はデータをきちんと見ることが大切だということを実際に見ていただくことで、多くの方に高く評価していただいております。 あなたにとって有用なツールかどうかは、どうぞデモをご覧になってお決めください。

Request a Demonstration

お客様の声

ユーザーアンケートの結果

以前使っていたけど、今はもう解析に使ってないソフトは何ですか?

  • 32 % GeneSpring
  • 17 % Excel
  • 8 % R & Bioconductor, Partek, Spotfire

解析ソフトにとって、下記の項目はどのくらい重要だと思いますか?(5段階評価の平均値)

  • 4.7 pt 簡単・インタラクティブな操作感で、探索的データマイニングができること。
  • 4.5 pt 高度に洗練された統計アルゴリズムと、解析の自動化。
  • 4.3 pt データブラウザーが無料で、ライセンス切れでデータを開けなくならないこと。
  • 4.3 pt 学んだり操作したりする時間がない時に、低価格で解析を委託できること。
  • 4.3 pt オンラインの技術サポートがいつでも無料で受けられること。

解析ソフトに必要なのは、統計機能だけではありません。 「簡単に使えること」や「質の高い技術サポート」を含む総合力が評価されて、Subio Platformはリピーターを増やしています。

お客様の声

Anonymous

A Univ., Professor/Manager

Anonymous

Low pricing and good support.

Anonymous

A Univ., Student

Anonymous

Although I never use other software, I think it's easy to browse data and the technical support is thorough.

Anonymous

A lab researcher, hospital

Anonymous

It is easy to use the software, and to manage lots of samples in the database.

この他のお客様からのコメントもどうぞご覧ください。

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